SubtiBank SubtiBank
rpmF [2019-07-08 10:51:28]
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rpmF [2019-07-08 10:51:28]

ribosomal protein
locus
BSU15080
pI
10.77
mw
6.59 kDa
protein length
59 aa Sequence Blast
gene length
180 bp Sequence Blast
function
translation
product
ribosomal protein L32
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.4|Ribosomal proteins]

    • Gene

    Coordinates
    1,575,804 1,575,983

    The protein

    Protein family

  • [SW|ribosomal protein] L32P family (according to UniProt)

    • Structure

  • [PDB|3J9W] (the [SW|ribosome]) [Pubmed|25903689]

    • Expression and Regulation

    Operons

    genes
    [gene|AF4BB5F08F805D3621597559B4C7F53A1A1CAD05|ylbN]-[gene|8C16300FC29E7DB5070367C8A2568134AF528233|rpmF]
    description
    [Pubmed|22383849]

    regulatory mechanism

  • [regulon|stringent response|stringent response]: negative regulation, in [regulon|stringent response|stringent response]

    • regulation

  • strongly repressed in response to glucose starvation in M9 medium [Pubmed|23033921]
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    Biological materials

    Mutant

  • BKE15080 ([gene|8C16300FC29E7DB5070367C8A2568134AF528233|rpmF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE15080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATTCCCACCTCCTTAA, downstream forward: _UP4_TAATGAGAAAAGCGCAGGGT
  • BKK15080 ([gene|8C16300FC29E7DB5070367C8A2568134AF528233|rpmF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK15080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATTCCCACCTCCTTAA, downstream forward: _UP4_TAATGAGAAAAGCGCAGGGT

    • References

  • 19653700,22383849,11948165,23002217,23033921,25903689